Evaluation of MIR-143 and MIR-145 genes methylation in lymph nodes of patients with diff use large B-cell lymphoma
https://doi.org/10.31549/2542-1174-2023-7-3-94-108
Abstract
I n t r o d u c t i o n . The expression of miR-143 and miR-145 oncosuppressive microRNAs is observed in all types of normal tissues studied and, according to numerous studies, it is lost in malignant neoplasms. A decrease in the expression of these microRNAs in diff use large B-cell lymphoma (DLBCL) is described, the mechanisms of which require additional study. A i m . To evaluate the methylation of MIR-143 and MIR-145 genes in the lymph node tissue of patients with DLBCL and lymph nodes of patients with reactive follicular hyperplasia.
M a t e r i a l s a n d m e t h o d s . The study included biopsies of 14 formalin-fi xed and paraffi nized tumor lymph nodes of patients with DLBCL and 11 lymph nodes of patients with reactive lymphadenopathy. The methylation status of the MIR-145 gene in samples was determined by the method of methyl-specifi c polymerase chain reaction. Direct bisulfi te sequencing based on the Sanger method was used to quantify the methylation of the MIR-143 gene.
R e s u l t s . It was found that all the studied samples, both reactive and tumor, had methylation of the MIR-145 gene. A similar level of methylation of CpG dinucleotides of the MIR-143 gene was registered in all samples of reactive lymph node tissue, whereas tumor samples showed greater heterogeneity. In the samples of DLBCL, namely a non-germinal B cell phenotype, the average level of methylation of the studied fragment of the MIR-143 gene sequence was signifi cantly lower, than in the samples of reactive lymph nodes (p = 0.026).
C o n c l u s i o n . The methylation of MIR-143 and MIR-145 genes detected in the lymph nodes of patients with DLBCL is not tumor-specifi c. The complex cellular composition of the analyzed samples, as well as the diff erent density of microvessels, may explain the diff erences in the level of MIR-143 methylation in the tissue of reactive and tumor lymph nodes.
About the Authors
E. N. VoropaevaRussian Federation
Elena N. Voropaeva – Dr. Sci. (Med.), Leading Researcher, Laboratory of Molecular and Genetic Studies of Internal Diseases; Associate Professor
Novosibirsk
T. I. Pospelova
Russian Federation
Tatyana I. Pospelova – Dr. Sci. (Med.), Professor, Head, Department of Therapy, Hematology and Transfusiology
Novosibirsk
M. I. Churkina
Russian Federation
Maria I. Churkina – Postgraduate Student, Department of Therapy, Hematology and Transfusiology
Novosibirsk
A. M. Nesterets
Russian Federation
Alina M. Nesterets – Junior Researcher, Laboratory of Genetic and Environmental Determinants of the Human Life Cycle
Novosibirsk
O. V. Berezina
Russian Federation
Olga V. Berezina – Cand. Sci. (Med.), Assistant, Department of Therapy, Hematology and Transfusiology
Novosibirsk
N. V. Skvortsova
Russian Federation
Nataliya V. Skvortsova – Dr. Sci. (Med.), Associate Professor, Department of Therapy, Hematology and Transfusiology
Novosibirsk
T. A. Ageeva
Russian Federation
Tatyana A. Ageeva – Dr. Sci. (Med.), Professor, Department of Pathological Anatomy
Novosibirsk
V. N. Maksimov
Russian Federation
Vladimir N. Maksimov – Dr. Sci. (Med.), Professor, Head, Laboratory of Molecular Genetic Studies of Internal Diseases; Associate Professor
Novosibirsk
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Review
For citations:
Voropaeva E.N., Pospelova T.I., Churkina M.I., Nesterets A.M., Berezina O.V., Skvortsova N.V., Ageeva T.A., Maksimov V.N. Evaluation of MIR-143 and MIR-145 genes methylation in lymph nodes of patients with diff use large B-cell lymphoma. Journal of Siberian Medical Sciences. 2023;(3):94-108. (In Russ.) https://doi.org/10.31549/2542-1174-2023-7-3-94-108